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Boyu Li, Nini Rao, Dingyu Liu, Yang Yang, Dingyun Liu, Hanming Liu, Tao Gan, Hui Ding, Hao Lin. Analysis of connection networks among miRNAs differentially expressed in early gastric cancer for disclosing some biological features of disease development. Gene, 2014, 548(2): 159-165
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Yi Li, Nini Rao, Feng Yang, Ying Zhang, Yang Yang, Han-Ming Liu, Fengbiao Guo, Jian Huang. Biocomputional construction of a gene network under acid stress in Synechocystis sp. PCC 6803. Research in Microbiology, 2014, 165(6): 420-428
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Hanming Liu, Nini Rao, et al. A Novel Method for Identifying SNPs-disease Association Based on Maximal Information Coefficient. Genetics and Molecular Research, 2014, 13(4): 10863-10877
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W. Feng, N. Rao, BY. Li, DY. Liu, F. Yang, HM. Liu, X. Chen. Computational prediction of miRNA signature related to valvular heart disease with atrial fibrillation using coherent data sources at different molecular levels. Cardiovascular Research, 2014, 103: S4
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F. Ou, N. Rao, X. Jiang, M. Qian, W. Feng, L. Yin, X. Chen. Analysis on Differential Gene Expression Data for Prediction of New Biological Features in Permanent Atrial Fibrillation. PLoS ONE, 2013, 8(10), e76166: 1-8
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Hui Ding, Shou-Hui Guo, En-Ze Deng, Lu-Feng Yuan, Feng-Biao Guo, Jian Huang, Nini Rao, Wei Chen, Hao Lin. Prediction of Golgi-resident protein types by using feature selection technique. Chemometrics and Intelligent Laboratory Systems, 2013, 124: 9-13
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H. Lin, C. Ding, L. F. Yuan, W. Chen, H. Ding, Z. Q. Li, F. B. Guo, J. Huang and N. Rao. Predicting subchloroplast location of proteins based on the general form of Chou’s pseudo amino acid composition: approached from optimal tripeptide composition.International Journal of Biomathematics, 2013, 6(2): 1350003-1-14
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F. B. Guo, W. Wei, X. L. Wang, H. Lin, H. Ding, J. Huang and N. Rao. Co-evolution of genomic islands and their bacterial hosts revealed through phylogenetic analyses of 17 groups of homologous genomic islands. Genetics and Molecular Research, 2012, 11(4): 3735-3743
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Jian Huang, Beibei Ru, Ping Zhu, Fulei Nie, Jun Yang, Xuyang Wang, Ping Dai, Hao Lin, Feng-Biao Guo and Nini Rao. MimoDB 2.0: a mimotope database and beyond. Nucleic Acids Research, 2012, Vol.40, Database issue D271–D277
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Shanglei Xu, Nini Rao, et al. Inferring an optimal threshold for predicting protein coding region of eukaryotes based on bootstrapping algorithm.Biotechnology Letters, 2011, 33(5): 889-896
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Jianxiu Guo, Nini Rao. Predicting protein folding rate from amina acid sequence. Journal of Bioinformatics and Computational Biology (JBCB), 2011, 9(1): 1-13
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Jianxiu Guo, Nini Rao, et al. Prediction of protein folding rate using amina acid sequence. Progress in biochemistry and biophysics, 2010, 37(12): 1331-1338
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Xi Chen, Nini Rao, et al. Modeling of genetic regulation networks based on Immune Memory Particle Swarm Optimization. 2010 10th International Conference on Signal Processing, 2010, Beijing. 1773-1776
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Shanglei Xu, Nini Rao, et al. Analysis of Threshold Influence on the Accuracy of Gene-prediction Methods Based on Power Spectrum Analysis. 2010 10th International Conference on Signal Processing, 2010, Beijing, 1777-1780
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Nini Rao, Xu Lei, et al. An Efficient Sliding Window Strategy for Accurate Location of Eukaryotic Protein Coding Regions. Computer in Biology and Medicine, 2009, 39(4): 392–395
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Tao Gan, Jun-Chao Wu, Ni-Ni Rao, Tao Chen, Bing Liu. A Feasibility Trial of Computer–aided Diagnosis for Enteric Lesions in Capsule Endoscopy. World J Gastroenterol, 2008, 14(45): 6929-6935
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Nini Rao, Xu Lei, et al. A Novel Sliding Window Strategy for Accurate Location of Coding Regions Based on Power Spectrum Analysis. Eleventh Annual International Confrence on Research in Computational Molecular Biology (RECOMB), San Francisco, April 21-25, 2007
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Bin Kuang, Nini Rao, et al. A Two–Block Motif Discovery Method with improved Prediction Accuracy. Lecture Notes in Computer Science, Vol.4681, Aug. 2007, 775–781
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Fengjun Han, Nini Rao. Mining co-regulated genes using Hash-tree based Association Rules combined with Genetic Algorithms. Proceedings of 2007 IEEE International Conference On Communications, Circuit and Systems, July 2007, Japan, Vol.II, 858–862
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Nini Rao and S. J. Shepherd. Extracting Characteristic Pattern from Genome–Wide Expression Data by NMF. Proceedings of the 2004 IEEE Computational Systems Bioinformatics Conference (CSB 2004), USA, Stanford University, Aug. 2004: 570–571