陈铭，博士，浙江大学，生命科学学院生物信息学系教授，院长助理。2007年入选教育部“新世纪优秀人才支持计划”。

研究领域

系统生物学、转录组表达与调控分析、基因芯片、第二代测序数据分析、生物数据挖掘，生物数据标准化、作物抗逆资源生物信息学技术开发与应用、生物医学信息学、合成生物学

教育背景

2005年 博士后，德国Bielefeld大学生物信息学

2004年 博士，德国Bielefeld大学

1998年 硕士，浙江工业大学

1995年 学士，浙江工业大学

工作经历

2007年 DAAD高访学者，德国Bielefeld大学IPK研究所

2006年 系副主任，浙江大学生命科学学院生物信息学系

2006年 DAAD高访学者，德国IPK研究所、Bielefeld大学

1999年 教师，浙江工业大学生物与环境工程学院

论文发表

1. Liya Liu#, Enyan Liu#, Yueming Hu, Sida Li, Shilong Zhang, Haoyu Chao, Yanshi Hu, Yanyan Zhu, Yifan Chen, Luyao Xie, Yi Shen, Liangwei Wu, Ming Chen* (2025)，ncPlantDB: A plant ncRNA database with potential ncPEP information and cell type-specific interaction，Nucleic Acids Research, 53(D1): D1587-D1594.
2. Fengyuan Mei#, Tianrui Yang#, Haoyu Chao, Xiaohui Ma, Jingjing Wu, Qi Yang, Guangpeng Ren, Li Song, Qian Wang, Liwang Qi, Xinxing Fu, Gegentu, Cuiping Gao, Ruigang Wang, Ming Chen, Xiangwen Fang, Jianquan Liu*, Guojing Li*, Shengdan Wu* (2025)，Genomic insights into drought adaptation of the forage shrub Caragana korshinskii (Fabaceae) widely planted in drylands，Plant Journal, 121(3): e17255.
3. Boyan Gong，Sida Li，Yifan Chen，Liya Liu，Ralf Hofestädt，Ming Chen* (2025)，STCDB4ND:A Signal Transduction Classification Database For Neurological Diseases，Database, baaf032.
4. Tianqi Lyu, Kerong Wu, Yincong Zhou, Tong Kong, Lin Li, Kaizhe Wang, Pan Fu, Pengyao Wei, Ming Chen*, Jianping Zheng* (2025)，Single-cell RNA sequencing reveals the tumor heterogeneity and immunosuppressive microenvironment in urothelial carcinoma，Cancer Science, 116(3): 710-723.
5. Shilong Zhang, Liangwei Wu, Zhimeng Zhao, J.R.Fernández Massó, Ming Chen* (2025)，Artificial Intelligence in Gerontology: Data-Driven Health Management and Precision Medicine，Advances in Gerontology, 2025.
6. Kai Wang, Yueming Hu, Sida Li, Ming Chen, Zhong Li* (2025)，LncLSTA: A versatile predictor unveiling subcellular localization of lncRNAs through long-short term attention，Bioinformatics Advances, vbae173.
7. Haoyu Chao, Zhuojin Li, Dijun Chen*, Ming Chen* (2024)，iSeq: An integrated tool to fetch public sequencing data，Bioinformatics, btae641.
8. Yi Shen, Liya Liu, Enyan Liu, Sida Li, Vladimir Ivanisenko, Yuriy Orlov, Ming Chen* (2024)，AthRiboNC: An Arabidopsis Database for ncRNAs with Coding Potential Revealed from Ribosome Profiling，Database, baae123.
9. Cong Feng#, Haoyan Fan#, Ruxiu Tie, Saige Xin, Ming Chen* (2024)，Deciphering the evolving niche interactome of human hematopoietic stem cells from ontogeny to aging，Frontiers in Molecular Biosciences, 11.
10. Yueming Hu#, Yejun Wang#, Xiaotian Hu, Haoyu Chao, Sida Li, Qingyang Ni, Yanyan Zhu, Yixue Hu, Ziyi Zhao, Ming Chen* (2024)，T4SEpp: A pipeline integrating protein language models to predict bacterial type IV secreted effectors，Computational and Structural Biotechnology Journal, 23: 801-812.
11. Shilong Zhang, Tongyao Yu, Ge Zhang, Ming Chen, Dachuan Yin*, Chenyan Zhang* (2024)，Systematic simulation of tumor cell invasion and migration in response to time‑varying rotating magnetic field，Biomechanics and Modeling in Mechanobiology, 23:1617–1630.
12. Yujie Chen, Yuriy Orlov, Ming Chen* (2024)，Deciphering the Molecular Mechanism of the Intermediate Secondary Growth and Internode Elongation of the Castor Bean (Ricinus communis L.) by the Combined Analysis of the Transcriptome and Metabolome，International Journal of Molecular Sciences, 25(2), 1053.
13. Ningning Yan, Shuqing Yang, Haoyu Chao, Wenbing Zhang, Jian Zhang, Ming Chen*, Jun Zhao* (2024)，Genome-wide characterization of the sunflower kinome: classification, evolutionary analysis and expression patterns under different stresses，Frontiers in Plant Science, 15: 1450936.
14. Hongjun Chen, Yekai Zhou, Yongjing Liu, Peijing Zhang, Ming Chen* (2023)，Network integration and protein structural binding analysis of neurodegeneration-related interactome，Briefings in Bioinformatics, 2023: bbad237.
15. Jintian Xu, Can Zhu, Mingzeng Su, Sida Li, Haoyu Chao*, Ming Chen* (2023)，CropGF: A Comprehensive Visual Platform for Crop Gene Family Mining and Analysis，Database, 2023: baad051.
16. Haoyu Chao, Shilong Zhang, Yueming Hu, Qingyang Ni, Saige Xin, Liang Zhao, Vladimir Ivanisenko, Yuriy Orlov, Ming Chen* (2023)，Integrating Omics Databases for Enhanced Crop Plant Breeding，Journal of Integrative Bioinformatics, 20: 20230012.