面向核酸检测的连续流PCR微流控技术研究进展
Advances in Continuous-Flow PCR Microfluidics for Nucleic Acid Detection
DOI: 10.12677/aac.2026.163024, PDF,   
作者: 彻乐木贡:上海理工大学机械工程学院,上海;李振庆*:上海理工大学光电信息与计算机工程学院,上海
关键词: 连续流PCR热循环核酸扩增即时检测液滴微流控Continuous-Flow PCR Thermal Cycling Nucleic Acid Amplification Point-of-Care Testing Droplet Microfluidics
摘要: 聚合酶链反应作为核酸检测的核心技术,在生命科学研究与临床诊断中发挥着不可替代的作用。传统热循环仪存在检测周期长、设备体积庞大、试剂消耗量大等局限,难以满足现场快速检测的多元需求。连续流PCR通过固定温区、流体跨区流动的模式实现热循环,规避了温控系统热惯性的影响,兼具扩增速度快、试剂消耗量低、易集成小型化等优势,是微流控核酸检测领域核心研究方向。迄今,已发展逶迤形、三维螺旋、振荡流、闭环循环流、液滴连续流等多类构型。在结构设计、性能优化与场景应用层面均取得了长足进展。本文系统梳理了连续流PCR的技术原理与结构演化脉络,阐述了该技术在临床即时检测、食品安全检测、环境监测等领域的应用现状。
Abstract: Polymerase chain reaction (PCR), as a core technology for nucleic acid detection, plays an indispensable role in life science research and clinical diagnosis. However, conventional thermal cyclers suffer from limitations such as long detection cycles, bulky instrumentation, and high reagent consumption, which hinder their ability to meet the diverse demands of on-site rapid testing. Continuous-flow PCR (CF-PCR) achieves thermal cycling by employing spatially fixed temperature zones with the fluid flowing across them, thereby circumventing the thermal inertia inherent in temperature control systems. This approach offers advantages including fast amplification, low reagent consumption, and ease of integration and miniaturization, establishing it as a key research direction in the field of microfluidic nucleic acid detection. To date, various configurations have been developed, including serpentine channels, three-dimensional helical structures, oscillating-flow systems, closed-loop circulatory designs, and droplet-based continuous-flow formats. Significant progress has been made in structural design, performance optimization, and application scenarios. This review systematically summarizes the working principles and structural evolution of continuous-flow PCR, and presents the current status of its applications in clinical point-of-care testing, food safety detection, and environmental monitoring.
文章引用:彻乐木贡, 李振庆. 面向核酸检测的连续流PCR微流控技术研究进展[J]. 分析化学进展, 2026, 16(3): 217-227. https://doi.org/10.12677/aac.2026.163024

参考文献

[1] Papadopoulos, V.E., Kokkoris, G., Kefala, I.N. and Tserepi, A. (2015) Comparison of Continuous-Flow and Static-Chamber μPCR Devices through a Computational Study: The Potential of Flexible Polymeric Substrates. Microfluidics and Nanofluidics, 19, 867-882.
https://doi.org/10.1007/s10404-015-1613-1
[2] Shu, B., Zhang, C. and Xing, D. (2015) A Handheld Flow Genetic Analysis System (FGAS): Towards Rapid, Sensitive, Quantitative and Multiplex Molecular Diagnosis at the Point-of-Care Level. Lab on a Chip, 15, 2597-2605.
https://doi.org/10.1039/c5lc00139k
[3] Nagai, H. and Fuchiwaki, Y. (2015) Portable Microfluidic System for Rapid Genetic Testing. Electronics and Communications in Japan, 98, 1-6.
https://doi.org/10.1002/ecj.11753
[4] Trinh, K.T.L. and Lee, N.Y. (2018) Glass-Polytetrafluoroethylene-Glass Based Sandwich Microdevice for Continuous-Flow Polymerase Chain Reaction and Its Application for Fast Identification of Foodborne Pathogens. Talanta, 176, 544-550.
https://doi.org/10.1016/j.talanta.2017.07.085
[5] Yang, B., Wang, P., Li, Z., You, Q., Sekine, S., Ma, J., et al. (2023) Simultaneous Amplification of DNA in a Multiplex Circular Array Shaped Continuous Flow PCR Microfluidic Chip for On-Site Detection of Bacterial. Lab on a Chip, 23, 2633-2639.
https://doi.org/10.1039/d3lc00274h
[6] Sheu, S., Song, Y. and Chen, J. (2022) A Portable Continuous-Flow Polymerase Chain Reaction Chip Device Integrated with Arduino Boards for Detecting Colla Corii Asini. Micromachines, 13, Article 1289.
https://doi.org/10.3390/mi13081289
[7] Tachibana, H., Saito, M., Tsuji, K., Yamanaka, K., Hoa, L.Q. and Tamiya, E. (2015) Self-Propelled Continuous-Flow PCR in Capillary-Driven Microfluidic Device: Microfluidic Behavior and DNA Amplification. Sensors and Actuators B: Chemical, 206, 303-310.
https://doi.org/10.1016/j.snb.2014.09.004
[8] Ragsdale, V., Li, H., Sant, H., Ameel, T. and Gale, B.K. (2016) A Disposable, Continuous-Flow Polymerase Chain Reaction Device: Design, Fabrication and Evaluation. Biomedical Microdevices, 18, Article No. 62.
https://doi.org/10.1007/s10544-016-0091-x
[9] Fan, W., Lok, B.K. and Lai, F.K. (2016) Evaluation of Printed Heating Elements for Continuous Flow PCR Application. 2016 IEEE 18th Electronics Packaging Technology Conference (EPTC), Singapore, 30 November 2016-3 December 2016, 360-364.
https://doi.org/10.1109/eptc.2016.7861505
[10] Bin Perwez, U., Aziz, I., Akhtar, I. and Zaidi, T. (2016) Thermal Modeling and Design Analysis of a Hybrid Microdevice for Continuous-Flow PCR Using One Heater. ASME International Mechanical Engineering Congress and Exposition, Phoenix, 11-17 November 2016, V010T13A038.
[11] Fernández-Carballo, B.L., McGuiness, I., McBeth, C., Kalashnikov, M., Borrós, S., Sharon, A., et al. (2016) Low-Cost, Real-Time, Continuous Flow PCR System for Pathogen Detection. Biomedical Microdevices, 18, Article No. 34.
https://doi.org/10.1007/s10544-016-0060-4
[12] Ajit, S., Praveen, H.M., Puneeth, S.B., Dave, A., Sesham, B., Mohan, K.N., et al. (2017) Towards Rapid Prototyped Convective Microfluidic DNA Amplification Platform. SPIE Proceedings, 10061, 100610H.
https://doi.org/10.1117/12.2257843
[13] Sivakumar, R., Trinh, K.T.L. and Lee, N.Y. (2020) Heat and Pressure-Resistant Room Temperature Irreversible Sealing of Hybrid PDMS-Thermoplastic Microfluidic Devices via Carbon-Nitrogen Covalent Bonding and Its Application in a Continuous-Flow Polymerase Chain Reaction. RSC Advances, 10, 16502-16509.
https://doi.org/10.1039/d0ra02332a
[14] Ghalekohneh, S.J., Zand, M.M., Banadaki, M.D., et al. (2020) Novel Fabrication Method of a Microfluidic Continuous Flow PCR.
https://doi.org/10.21203/rs.3.rs-28384/v1
[15] Li, Z., Li, Y., Sekine, S., Xi, H., Amano, A., Zhang, D., et al. (2020) Design and Fabrication of Portable Continuous Flow PCR Microfluidic Chip for DNA Replication. Biomedical Microdevices, 22, Article No. 5.
https://doi.org/10.1007/s10544-019-0457-y
[16] Li, Z., Liu, J., Wang, P., Tao, C., Zheng, L., Sekine, S., et al. (2021) Multiplex Amplification of Target Genes of Periodontal Pathogens in Continuous Flow PCR Microfluidic Chip. Lab on a Chip, 21, 3159-3164.
https://doi.org/10.1039/d1lc00457c
[17] Yang, B., Wang, P., Li, Z., Tao, C., You, Q., Sekine, S., et al. (2022) A Continuous Flow PCR Array Microfluidic Chip Applied for Simultaneous Amplification of Target Genes of Periodontal Pathogens. Lab on a Chip, 22, 733-737.
https://doi.org/10.1039/d1lc00814e
[18] Zagklavara, F., Jimack, P.K., Kapur, N., Querin, O.M. and Thompson, H.M. (2021) Numerical Modelling and Analysis Ofa Microfluidic PCR Device. World Congress on Momentum, Heat and Mass Transfer, Lisbon, 17-19 June 2021, 1-6.
https://doi.org/10.11159/enfht21.lx.201
[19] Zagklavara, F., Jimack, P.K., Kapur, N., Querin, O.M. and Thompson, H.M. (2021) Optimisation of Microfluidic Polymerase Chain Reaction Devices. E3S Web of Conferences, 321, Article 01007.
https://doi.org/10.1051/e3sconf/202132101007
[20] Zagklavara, F., Jimack, P.K., Kapur, N., Querin, O.M. and Thompson, H.M. (2022) Multi-Objective Optimisation of Polymerase Chain Reaction Continuous Flow Systems. Biomedical Microdevices, 24, Article No. 16.
https://doi.org/10.1007/s10544-022-00610-6
[21] Zhou, N., Han, H., Fang, L., Li, S. and Lei, L. (2025) Structure Optimization of Polymerase Chain Reaction Devices under High Flow Rate: A Numerical Study. Micromachines, 17, Article 21.
https://doi.org/10.3390/mi17010021
[22] Chen, J.J. and Qiu, X.C. (2024) The Effect of the Surface Passivation on Polymerase Chain Reaction inside a Continuous Flow Microfluidic Chip. Microsystem Technologies, 31, 25-43.
https://doi.org/10.1007/s00542-024-05675-2
[23] Kulkarni, M.B. and Goel, S. (2021) Miniaturized DNA Amplification Platform with Soft-Lithographically Fabricated Continuous-Flow PCR Microfluidic Device on a Portable Temperature Controller. Microfluidics and Nanofluidics, 25, Article No. 69.
https://doi.org/10.1007/s10404-021-02473-4
[24] Kim, H.E., Schuck, A., Kim, W., Jung, E.K., Hong, Y. and Kim, Y. (2022) PID Temperature Control System-Based Microfluidic PCR Chip for Genetic Analysis. Journal of Electrical Engineering & Technology, 17, 495-501.
https://doi.org/10.1007/s42835-021-00969-1
[25] Yang, B., Huang, J., Tao, C., Li, Z., Zhang, D. and Yamaguchi, Y. (2023) Detection of Periodontal Pathogens Based on an Integrated Continuous Flow PCR and Capillary Electrophoresis Microfluidic Chip. Separations, 10, Article 271.
https://doi.org/10.3390/separations10040271
[26] Kulkarni, M.B. and Goel, S. (2023) Mini-Thermal Platform Integrated with Microfluidic Device with On-Site Detection for Real-Time DNA Amplification. BioTechniques, 74, 158-171.
https://doi.org/10.2144/btn-2022-0091
[27] Mortensen, J.S. and Pedersen, L.S. (2025) Design and Fabrication of a Continuous-Flow PCR Chip. Master’s Thesis, Aalborg University, Aalborg.
https://projekter.aau.dk/design-and-fabrication-of-a-continuous-flow-pcr-chip-83c470c7.html
[28] Zhou, R., Ding, Y., Sun, Y., Yang, J., Yu, Y., Pang, J., et al. (2023) Spatial Continuous-Flow Polymerase Chain Reaction Structure Controlled by Single-Temperature Driver. AIP Advances, 13, Article 075117.
[29] Fernández-Carballo, B.L., McBeth, C., McGuiness, I., Kalashnikov, M., Baum, C., Borrós, S., et al. (2018) Continuous-Flow, Microfluidic, QRT-PCR System for RNA Virus Detection. Analytical and Bioanalytical Chemistry, 410, 33-43.
https://doi.org/10.1007/s00216-017-0689-8
[30] Kim, H., Park, N. and Hahn, J.H. (2016) Parallel-Processing Continuous-Flow Device for Optimization-Free Polymerase Chain Reaction. Analytical and Bioanalytical Chemistry, 408, 6751-6758.
https://doi.org/10.1007/s00216-016-9798-z
[31] Trinh, K.T.L., Wu, W. and Lee, N.Y. (2017) Fabrication of a 3D Teflon Microdevice for Energy Free Homogeneous Liquid Flow inside a Long Microchannel and Its Application to Continuous-Flow PCR. RSC Advances, 7, 10624-10630.
https://doi.org/10.1039/c6ra28765d
[32] Trinh, K.T.L. and Lee, N.Y. (2017) A Portable Microreactor with Minimal Accessories for Polymerase Chain Reaction: Application to the Determination of Foodborne Pathogens. Microchimica Acta, 184, 4225-4233.
https://doi.org/10.1007/s00604-017-2451-5
[33] Thomas, S., Orozco, R.L. and Ameel, T. (2017) Microscale Thermal Gradient Continuous-Flow PCR: A Guide to Operation. Sensors and Actuators B: Chemical, 247, 889-895.
https://doi.org/10.1016/j.snb.2017.03.005
[34] Jiang, Y., Wu, G. and Wu, W. (2019) Fabrication of a 3D Microreactor Utilizing a Screw and Its Application in a Continuous Polymerase Chain Reaction. ACS Omega, 4, 1534-1540.
https://doi.org/10.1021/acsomega.8b02873
[35] Yang, Q., Zhou, W., Li, H., Huang, J., Song, Z., Cheng, L., et al. (2024) A Continuous Polymerase Chain Reaction 3D Spiral Microreactor Capable of Facile and On-Demand Fabrication. Analytica Chimica Acta, 1310, Article 342692.
https://doi.org/10.1016/j.aca.2024.342692
[36] Shi, B., He, G. and Wu, W. (2018) A PCR Microreactor Machinery with Passive Micropump and Battery-Powered Heater for Thermo-Cycled Amplifications of Clinical-Level and Multiplexed DNA Targets. Microchimica Acta, 185, Article No. 467.
https://doi.org/10.1007/s00604-018-3007-z
[37] Pham, Q.N., Trinh, K.T.L., Tran, N.K.S., Park, T. and Lee, N.Y. (2018) Fabrication of 3D Continuous-Flow Reverse-Transcription Polymerase Chain Reaction Microdevice Integrated with On-Chip Fluorescence Detection for Semi-Quantitative Assessment of Gene Expression. The Analyst, 143, 5692-5701.
https://doi.org/10.1039/c8an01739e
[38] Wang, K., Wu, D. and Wu, W. (2019) A New Self-Activated Micropumping Mechanism Capable of Continuous-Flow and Real-Time PCR Amplification inside 3D Spiral Microreactor. Micromachines, 10, Article 685.
https://doi.org/10.3390/mi10100685
[39] Wu, D. and Wu, W. (2019) Battery Powered Portable Thermal Cycler for Continuous-Flow Polymerase Chain Reaction Diagnosis by Single Thermostatic Thermoelectric Cooler and Open-Loop Controller. Sensors, 19, Article 1609.
https://doi.org/10.3390/s19071609
[40] Jiang, Y., Wu, G., Li, Y. and Wu, W. (2019) Diameter-Definable Tubing-Microchips for Applications in Both Continuous-Flow and Tec-Modulated On-Chip qPCRS with Reaction Signal Analyzed between Different Types of Teflon-Polymers: PTFE and FEP. RSC Advances, 9, 2650-2656.
https://doi.org/10.1039/c8ra09773a
[41] Chang, Y. and You, H. (2020) Efficient Bond of PDMS and Printed Circuit Board with an Application on Continuous-Flow Polymerase Chain Reaction. BioChip Journal, 14, 349-357.
https://doi.org/10.1007/s13206-020-4403-0
[42] Song, W., Wu, D., Xing, Y. and Wu, W. (2026) A Novel Continuous-Flow PCR Microdevice Operated by a Single Heat Source. Micromachines, 17, Article 805.
https://doi.org/10.3390/mi17070805
[43] Kopparthy, V.L. and Crews, N.D. (2020) A Versatile Oscillating‐Flow Microfluidic PCR System Utilizing a Thermal Gradient for Nucleic Acid Analysis. Biotechnology and Bioengineering, 117, 1525-1532.
https://doi.org/10.1002/bit.27278
[44] Zhou, R., Sun, Y., Luan, Y., Jia, W., Yu, Y., Yang, J., et al. (2024) High Throughput Oscillating-Flow Structure for Polymerase Chain Reaction. AIP Advances, 14, Article 065211.
https://doi.org/10.1063/5.0209492
[45] Haber, J.M., Gascoyne, P.R.C. and Sokolov, K. (2017) Rapid Real-Time Recirculating PCR Using Localized Surface Plasmon Resonance (LSPR) and Piezo-Electric Pumping. Lab on a Chip, 17, 2821-2830.
https://doi.org/10.1039/c7lc00211d
[46] Liu, L., et al. (2015) Multiplexed, Continuous-Flow, Droplet-Based PCR Genotyping Platform for High-Throughput Agricultural Marker Assisted Selection. 19th International Conference on Miniaturized Systems for Chemistry and Life Sciences, MicroTAS 2015, Gyeongju, 25-29 October 2015, 1368-1370.
https://pure.johnshopkins.edu/en/publications/multiplexed-continuous-flow-droplet-based-pcr-genotyping-platform/
[47] Liu, W., Zhu, Y., Feng, Y., Fang, J. and Fang, Q. (2017) Droplet-Based Multivolume Digital Polymerase Chain Reaction by a Surface-Assisted Multifactor Fluid Segmentation Approach. Analytical Chemistry, 89, 822-829.
https://doi.org/10.1021/acs.analchem.6b03687
[48] Li, B., Li, Y., Jiang, Y., Manz, A. and Wu, W. (2020) A Digital PCR System Based on the Thermal Cycled Chip with Multi Helix Winding Capillary. Scientific Reports, 10, Article No. 17824.
https://doi.org/10.1038/s41598-020-74711-8
[49] Wang, K., Li, B. and Wu, W. (2020) Compressed Air-Driven Continuous-Flow Thermocycled Digital PCR for HBV Diagnosis in Clinical-Level Serum Sample Based on Single Hot Plate. Molecules, 25, Article 5646.
https://doi.org/10.3390/molecules25235646
[50] Hajji, I., Serra, M., Geremie, L., Ferrante, I., Renault, R., Viovy, J., et al. (2020) Droplet Microfluidic Platform for Fast and Continuous-Flow RT-qPCR Analysis Devoted to Cancer Diagnosis Application. Sensors and Actuators B: Chemical, 303, Article 127171.
https://doi.org/10.1016/j.snb.2019.127171
[51] Jiang, Y., Manz, A. and Wu, W. (2020) Fully Automatic Integrated Continuous-Flow Digital PCR Device for Absolute DNA Quantification. Analytica Chimica Acta, 1125, 50-56.
https://doi.org/10.1016/j.aca.2020.05.044
[52] Li, B., Li, Y., Manz, A. and Wu, W. (2020) Miniaturized Continuous-Flow Digital PCR for Clinical-Level Serum Sample Based on the 3D Microfluidics and CMOS Imaging Device. Sensors, 20, Article 2492.
https://doi.org/10.3390/s20092492
[53] Li, Z., Wang, Y., Gao, Z., Sekine, S., You, Q., Zhuang, S., et al. (2023) Lower Fluidic Resistance of Double-Layer Droplet Continuous Flow PCR Microfluidic Chip for Rapid Detection of Bacteria. Analytica Chimica Acta, 1251, Article 340995.
https://doi.org/10.1016/j.aca.2023.340995
[54] Meng, J., Zhang, H., Sun, X., Yu, C., Feng, X., Wei, C., et al. (2025) Investigation on Droplet Heat Transfer Characteristics of Continuous-Flow PCR. Analytical Chemistry, 97, 24486-24494.
https://doi.org/10.1021/acs.analchem.5c04157
[55] Lu, X., Jia, Q., Zheng, Y., Qin, Z., Li, Y., Shi, C., et al. (2025) A Novel Method of Droplet Generation Based on the Self-Propelling of Water Phase and Its Potential Application in Multiplexing Continuous Flow PCR. Biosensors and Bioelectronics, 279, Article 117400.
https://doi.org/10.1016/j.bios.2025.117400