基于网络药理学及分子对接探讨参桂汤治疗心律失常的作用机制
Study on the Mechanism of Shengui Decoction in Treating Arrhythmia Based on Network Pharmacology
DOI: 10.12677/ACM.2024.142641, PDF,   
作者: 邢 蔚, 李国建:黑龙江中医药大学研究生院,黑龙江 哈尔滨;王凤儒*:黑龙江中医药大学附属第一医院心血管四科,黑龙江 哈尔滨
关键词: 网络药理学分子对接参桂汤心律失常机制Network Pharmacology Molecular Docking Shengui Decoction Arrhythmia Mechanism
摘要: 目的:利用网络药理学探讨参桂汤治疗心律失常的作用机制。方法:通过TCMSP数据库收集参桂汤药物的有效成分及靶点;利用UniProt数据库获取转换靶点基因名;借助人类基因数据库(GeneCards),Disgenet,DrugBank数据库寻找治疗心律失常的潜在靶点;合并去重后与参桂汤靶点取交集并绘制Venny图;通过STRING数据库分析得出蛋白质相互作用,且通过Cytoscape 3.9.1绘制关键靶点的(PPI)互作网络图。利用Metascape平台进行KEGG通路和GO功能富集分析,后通过Cytoscape 3.9.1软件构建参桂汤对心律失常的药物–药物成分–靶点–疾病–通路网络图。利用Autodock tools 1.5.7、Autodock vina 1.1.2对核心靶点及对应成分进行分子对接,并运用Pymol 2.5软件进行视化处理。结果:参桂汤对治疗心律失常的过程中存在多种成分、多靶点和多通路之间的网络关系,为进一步为研究参桂汤对治疗心律失常的作用机制具有借鉴意义。
Abstract: Objective: To explore the mechanism of treating arrhythmia by means of network pharmacology. Methods: the effective components and targets of compound Shengui decoction were collected by TCMSP database, the gene names of conversion targets were obtained by UniProt database, the po-tential targets for the treatment of arrhythmias were found with the help of human gene database (GeneCards) and Disgenet, DrugBank database, and the target sites of compound Shengui decoction were intersected with the target points of compound Shengui decoction and Venny map was drawn. The protein-protein interaction data were analyzed by STRING database platform, and the (PPI) in-teraction network diagram of key targets was drawn by Cytoscape 3.9.1. The KEGG pathway and GO function enrichment analysis were carried out on the Metascape platform, and then the chemical composition-potential target-signal pathway network of compound Shengui decoction on arrhyth-mia was constructed by Cytoscape 3.9.1 software. Results: there is a network relationship among multiple components, multi-targets and multi-pathways in the treatment of arrhythmias, which can be used as a reference for further studying the mechanism of Shengui decoction in the treatment of arrhythmias.
文章引用:邢蔚, 李国建, 王凤儒. 基于网络药理学及分子对接探讨参桂汤治疗心律失常的作用机制[J]. 临床医学进展, 2024, 14(2): 4619-4628. https://doi.org/10.12677/ACM.2024.142641

参考文献

[1] Ai, X., Yan, J. and Pogwizd, S.M. (2021) Serine-Threonine Protein Phosphatase Regulation of Cx43 Dephosphorylation in Arrhythmogenic Disorders. Cellular Signalling, 86, Article ID: 110070. [Google Scholar] [CrossRef] [PubMed]
[2] Asimaki, A. and Saffitz, J.E. (2014) Remodeling of Cell-Cell Junctions in Arrhythmogenic Cardiomyopathy. Cell Communication & Adhesion, 21, 13-23. [Google Scholar] [CrossRef] [PubMed]
[3] Liu, Y. and Tse, H.F. (2011) The Proarrhythmic Risk of Cell Therapy for Cardiovascular Diseases. Expert Review of Cardiovascular Therapy, 9, 1593-1601. [Google Scholar] [CrossRef] [PubMed]
[4] Chen, M., Li, X., Wang, S., et al. (2020) The Role of Cardiac Macrophage and Cytokines on Ventricular Arrhythmias. Frontiers in Physiology, 11, Article 1113. [Google Scholar] [CrossRef] [PubMed]
[5] Chang, J.H., Cheng, C.C., Lu, Y.Y., et al. (2021) Vascular Endo-thelial Growth Factor Modulates Pulmonary Vein Arrhythmogenesis via Vascular Endothelial Growth Factor Receptor 1/NOS Pathway. European Journal of Pharmacology, 911, Article ID: 174547. [Google Scholar] [CrossRef] [PubMed]
[6] Soman, S., Raju, R., Sandhya, V.K., et al. (2013) A Multicellular Signal Transduction Network of AGE/RAGE Signaling. Journal of Cell Communication and Signaling, 7, 19-23. [Google Scholar] [CrossRef] [PubMed]
[7] 郑诗悦, 杨阳, 赵德超. HIF-1α在心血管病中的作用[J]. 临床与病理杂志, 2021, 41(5): 1146-1150.
[8] Mersmann, J., Koch, A., Tran, N., et al. (2010) Toll-Like Receptor 2 Sig-naling Triggers Fatal Arrhythmias upon Myocardial Ischemia-Reperfusion. Critical Care Medicine, 38, 1927-1932. [Google Scholar] [CrossRef
[9] Sun, X.Y., Jia, L.Y., Rong, Z., et al. (2022) Research Ad-vances on Matrine. Frontiers in Chemistry, 10, Article ID: 867318. [Google Scholar] [CrossRef] [PubMed]
[10] 张明发, 沈雅琴. 苦参碱抗心律失常的临床治疗及其机制的研究进展[J]. 抗感染药学, 2021, 18(2): 153-158.
[11] 杜秋明, 李忠诚, 王贵荣, 等. 丹参酮ⅡA磺酸钠对大鼠心肌缺血/再灌注心律失常的影响[J]. 中国中西医结合急救杂志, 2008, 15(3): 183-184.
[12] 李涛, 袁春桃. 丹参酮ⅡA对缺血再灌注损伤大鼠心肌组织和心律失常的保护作用[J]. 中国老年学杂志, 2017, 37(13): 3154-3156.
[13] 王凤儒, 徐京育, 杜琳, 等. 参桂汤对大鼠急性心肌缺血的保护作用[J]. 中国中医急症, 2020, 29(3): 395-398.
[14] Li, W., Yin, L., Shen, C., et al. (2018) SCN5A Variants: Association with Cardiac Disorders. Frontiers in Physiology, 9, Article 1372. [Google Scholar] [CrossRef] [PubMed]
[15] Van Den Boogaard, M., Van Weerd, J.H., Bawazeer, A.C., et al. (2019) Identification and Characterization of a Transcribed Distal Enhancer Involved in Cardiac Kcnh2 Regulation. Cell Reports, 28, 2704-2714.e2705. [Google Scholar] [CrossRef] [PubMed]
[16] Whisenant, C.C. and Shaw, R.M. (2022) Internal Translation of Gja1 (Connexin43) to Produce GJA1-20k: Implications for Arrhythmia and Ischemic-Preconditioning. Frontiers in Physiology, 13, Article ID: 1058954. [Google Scholar] [CrossRef] [PubMed]
[17] 富丽娟, 皮林, 詹小娜, 等. 室性心律失常患者血清微小核糖核酸-155及130表达及白介素水平的变化与临床意义[J]. 心肺血管病杂志, 2022, 41(3): 238-242.
[18] 胡洸瑜, 杨容金, 孙芳芳,等. 过表达Fas激活的丝氨酸/苏氨酸激酶减轻缺氧/复氧损伤导致的心肌细胞线粒体呼吸功能障碍[J]. 心脏杂志, 2021, 33(2): 123-126+132.
[19] Lu, Y.Y., Lin, F.J., Chen, Y.C., et al. (2022) Role of Endothelin-1 in Right Atrial Arrhythmogenesis in Rabbits with Monocrotaline-Induced Pulmonary Arterial Hypertension. Internation-al Journal of Molecular Sciences, 23, Article 10993. [Google Scholar] [CrossRef] [PubMed]
[20] Wang, C.G., Qin, X.C., Nie, S.P., et al. (2019) C-Reactive Protein as a Predictor of Malignant Ventricular Arrhythmias in Non-ST Eleva-tion Myocardial Infarction. Journal of Geriatric Cardiology, 16, 614-620.
[21] Chen, Y., Chen, Z.J., Liao, Y.H., et al. (2010) Effect of Tumor Necrosis Factor-α on Ventricular Arrhythmias in Rats with Acute Myocardial Infarction in Vivo. World Journal of Emergency Medicine, 1, 53-58.