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● G. Toledo-Ortiz, E. Huq, and P. H. Quail. The Arabidopsis basic/helix-loop-helix...
● V. Ledent, O. Paquet, and M. Vervoort. Phylogenetic analysis of the human basic ...
● W. R. Atchley, W. Terhalle, and A. Dress. Positional dependence, cliques, and pr...
● C. Murre, C. P. Mc, and D. Baltimore. A new DNA binding and dimerizing motif in ...
● L. Carretero-Paulet, A. Galstyan, I. Roig-Villanova, et al. Genome-wide classifi...
● J. D. Stevens, E. H. Roalson, and M. K. Skinner. Phylogenetic and expression ana...
● V. Ledent, M. Vervoort. The basic helix-loop-helix protein family: Comparative g...
● M. E. Massari, C. Murre. Helix-loop-helix proteins: Regulators of transcription ...
● W. R. Atchley, W. M. Fitch. A natural classification of the basic helix-loop-hel...
● J. L. Riechmann, J. Heard, G. Martin, et al. Arabidopsis transcription factors: ...
● N. M. Luscombe, S. E. Austin, H. M. Berman, et al. An overview of the structures...
● T. J. Boggon, W. S. Shan, S. Santagata, et al. Implication of tubby proteins as ...
● J. Eid, A. Fehr, J Gray, et al. Real-time DNA sequencing from single polymerase ...
● G. Robertson, M. Hirst, M. Bainbridge, et al. Genome-wide profiles of STAT1 DNA ...
● T. S. Mikkelsen, M. Ku, D. B. Jaffe, et al. Genome-wide maps of chromatin state ...
● A. Barski, S. Cuddapah, K. Cui, et al. High-resolution profiling of histone meth...
● R. Jothi, S. Cuddapah, A. Barski, et al. Genome-wide identifica-tion of in vivo ...
● A. P. Fejes, G. Robertson, M. Bilenky, et al. FindPeaks 3.1: A tool for identify...
● Z. S. Qin, J. Yu, J. Shen, et al. HPeak: An HMM-based algo-rithm for defining re...
● Y. Zhang, T. Liu, C. A. Meyer, et al. Model-based analysis of ChIP-Seq (MACS). G...
● D. S. Johnson, A. Mortazavi, R. M. Myers, et al. Genome-wide mapping of in vivo ...
● H. Ji, H. Jiang, W. Ma, et al. An integrated software system for analyzing ChIP-...
● B. D. Ondov, A. Varadarajan, K. D. Passalacqua, et al. Efficient mapping of Appl...
● S. M. Rumble, P. Lacroute, A. V. Dalca, et al. SHRiMP: Accu-rate mapping of shor...
● B. Langmead, C. Trapnell, M. Pop, et al. Ultrafast and mem-ory-efficient alignme...
● H. Li, J. Ruan, and R. Durbin. Mapping short DNA sequencing reads and calling va...
● H. Jiang, W. H. Wong. SeqMap: Mapping massive amount of oligonucleotides to the ...
● Welcome Trust Sanger Institute, Genome Research Limited. GFF (General Feature Fo...
● Browser UG. UCSC Genome Browser: Wiggle Track Format (WIG)[URL]. http://genome....
● C. Chen, H. Wan, and Q. Zhou. The next generation sequencing technology and its ...

● G. Toledo-Ortiz, E. Huq, and P. H. Quail. The Arabidopsis basic/helix-loop-helix...

● V. Ledent, O. Paquet, and M. Vervoort. Phylogenetic analysis of the human basic ...

● W. R. Atchley, W. Terhalle, and A. Dress. Positional dependence, cliques, and pr...

● C. Murre, C. P. Mc, and D. Baltimore. A new DNA binding and dimerizing motif in ...

● L. Carretero-Paulet, A. Galstyan, I. Roig-Villanova, et al. Genome-wide classifi...

● J. D. Stevens, E. H. Roalson, and M. K. Skinner. Phylogenetic and expression ana...

● V. Ledent, M. Vervoort. The basic helix-loop-helix protein family: Comparative g...

● M. E. Massari, C. Murre. Helix-loop-helix proteins: Regulators of transcription ...

● W. R. Atchley, W. M. Fitch. A natural classification of the basic helix-loop-hel...

● J. L. Riechmann, J. Heard, G. Martin, et al. Arabidopsis transcription factors: ...

● N. M. Luscombe, S. E. Austin, H. M. Berman, et al. An overview of the structures...

● T. J. Boggon, W. S. Shan, S. Santagata, et al. Implication of tubby proteins as ...