基于网络药理学探讨治疗甲状腺癌的靶向药物
Study on the Targeted Drugs for the Treatment of Thyroid Cancer Based on Network Pharmacology
DOI: 10.12677/acm.2024.1492483, PDF,    国家自然科学基金支持
作者: 王斯炯, 宋 浩, 刘润泽, 丁 楠, 杨庚宁, 李权洲, 权欣怡:甘肃中医药大学第一临床学院,甘肃 兰州;庞月苓, 陈丽苹, 张 宇, 马欢欢, 何振宇, 丁小山:甘肃中医药大学基础医学院,甘肃 兰州;李 玲*:甘肃中医药大学基础医学院,甘肃 兰州;甘肃中医药大学,甘肃省高校重大疾病分子医学与中医药防治研究重点实验室,甘肃 兰州;李佳蔚*:甘肃中医药大学基础医学院,甘肃 兰州;甘肃中医药大学,甘肃省高校重大疾病分子医学与中医药防治研究重点实验室,甘肃 兰州;甘肃中医药大学,甘肃省中医药防治慢性疾病重点实验室,甘肃 兰州
关键词: 网络药理学甲状腺癌整合治疗靶向机制Network Pharmacology Thyroid Cancer Integrated Treatment Targeted Mechanism
摘要: 目的:甲状腺癌是一种常见的内分泌系统恶性肿瘤,在全球新诊断的肿瘤中占比约2.1%。近年来,甲状腺癌的发病率呈现上升趋势,对人类健康构成了严重威胁。本研究综述了当前用于甲状腺癌治疗的靶向药物,并运用网络药理学方法进行了分析,以揭示其作用机制和可能的治疗靶点为目的,为进一步研究和临床实践甲状腺癌靶向药物应用提供新的思路。方法:首先,通过文献的检索,对目前治疗甲状腺癌的靶向药物进行了检索,包括索拉非尼、仑伐替尼、凡德他尼、卡博替尼等。再从网络药理学的角度进行探究,借助DrugBank、Uniprot数据库和文献检索分子靶点与药物作用靶点。GeneCards和DrugBank和数据库,利用VENNY 2.1网站将所得到的有效成分靶点与Thyroid Carcinoma靶点构建韦恩图。采用STRING数据库和Cytoscape软件构建蛋白–蛋白相互作用网络及“药物–潜在活性成分–作用靶点”相互作用网络(PPI)。通过DAVID数据库对共同靶点进一步进行基因本体论(GO)功能分析和京都基因与基因组百科全书(KEEG)通路富集分析,筛选关键通路,并通过微生信绘制GO网络图、KEGG图和关键靶点–通路图,揭示药物可能发挥作用的机制。结果:通过针对甲状腺癌的靶向治疗药物主要有索拉非尼、仑伐替尼、凡德他尼、卡博替尼等多种分子靶向药物。基于数据库和软件筛选,确定有效成分及其相关靶点。结合药物–组分–靶点网络图揭示在胚胎发育、细胞增殖等方面的重要性。分析GO功能富集揭示药物调节多细胞生物发育、细胞增殖等生物学过程发挥作用。KEGG功能富集分析显示MAPK讯号路径、PI3K-AKT讯号路径等多条机制路径与甲状腺癌治疗高度相关。结论:分析目前治疗甲状腺癌的靶向药物及其作用机制,揭示临床药物通过多途径介入治疗甲状腺癌的发生和发展。同时构建的药物–成分–靶点网络及功能富集分析为进一步临床整合治疗提供重要参考。
Abstract: Objective: Thyroid cancer is a common malignant tumor of the endocrine system, accounting for approximately 2.1% of newly diagnosed tumors on the globe. In recent years, the incidence rate of thyroid cancer is on the rise, posing a serious threat to human health. Therefore, this study reviews the targeted drugs currently used for the treatment of thyroid cancer and analyzes them using network pharmacology methods to reveal their mechanisms of action and potential therapeutic targets, providing new ideas for further research and clinical practice of the applications of targeted drug in thyroid cancer. Methods: First, a search was done on the current targeted drugs for the treatment of thyroid cancer by searching relevant literatures, including sorafenib, lenvatinib, vandetanib, cabozantinib and so on. Then, exploring from the perspective of network pharmacology, DrugBank, Uniprot databases, literature searches were used to identify molecular targets and drug targets. GeneCards, DrugBank and databases were searched and the VENNY 2.1 website was used to construct a Venn diagram by combining the obtained effective ingredient targets with thyroid cancer targets. Protein-Protein Interaction Networks and Drug-Potential Active Ingredient-Target Interaction Networks (PPI) were constructed using STRING database and Cytoscape software. Gene Ontology (GO) functional analysis and Kyoto Encyclopedia of Genes and Genomes (KEEG) pathway enrichment analysis were further conducted on common targets through the DAVID database to screen for key pathways. GO network diagrams, KEGG diagrams and key target pathways diagrams were drawn using Microbiology Data to reveal the possible mechanisms of drug functions. Results: Currently, the targeted therapeutic drugs for thyroid cancer mainly include molecular targeted drugs such as sorafenib, lenvatinib, vandetanib, cabozantinib and so on. Based on databases and software screening, the effective ingredients and related targets were determined. Combining with the drug-component-target network diagram, the importance of some targets in embryonic development, cell proliferation, and other aspects were revealed. Analyzing GO functional enrichment revealed that drugs exert their effects by regulating biological processes such as multicellular biological development and cell proliferation. KEGG functional enrichment analysis showed that multiple pathways such as MAPK signaling pathway and PI3K-AKT signaling pathway and so on were highly correlated with the treatment of thyroid cancer. Conclusion: We analyzed the current targeted drugs for the treatment of thyroid cancer and their mechanisms of function, revealing that clinical drugs intervene in the treatment of the occurrence and development of thyroid cancer through multiple pathways. At the same time, the constructed drug-component-target network and functional enrichment analysis provide important references for further clinical integrated therapy.
文章引用:王斯炯, 庞月苓, 宋浩, 刘润泽, 陈丽苹, 张宇, 马欢欢, 何振宇, 丁小山, 丁楠, 杨庚宁, 李权洲, 权欣怡, 李玲, 李佳蔚. 基于网络药理学探讨治疗甲状腺癌的靶向药物[J]. 临床医学进展, 2024, 14(9): 453-467. https://doi.org/10.12677/acm.2024.1492483

参考文献

[1] National Health Commission of the People’s Republic of China Medical Administration and Hospital Administration. 甲状腺癌诊疗指南(2022年版) [J]. 中国实用外科杂志, 2022, 42(12): 1343-1357+1363.
[2] 渠宁, 王钰婷, 马奔, 等. 2022年度甲状腺癌研究及诊疗新进展[J]. 2023, 33(5): 423-430.
[3] 房居高, 杨帆. 甲状腺微小乳头状癌规范化诊疗的进展与争议[J]. 2021, 27(1): 1-5.
[4] 卢甜, 文芳. 晚期甲状腺癌个体化靶向治疗研究进展[J]. 2015, 31(4): 532-535.
[5] Laha, D., Nilubol, N. and Boufraqech, M. (2020) New Therapies for Advanced Thyroid Cancer. Frontiers in Endocrinology, 11, Article 82. [Google Scholar] [CrossRef] [PubMed]
[6] 张杰, 徐书杭, 刘超.《CSCO甲状腺髓样癌诊疗指南2022》指南解读: 术后随访[J]. 2023, 36(11): 936-939.
[7] Sun, Y., Selvarajan, S., Zang, Z., Liu, W., Zhu, Y., Zhang, H., et al. (2022) Author Correction: Artificial Intelligence Defines Protein-Based Classification of Thyroid Nodules. Cell Discovery, 8, Article No. 100. [Google Scholar] [CrossRef] [PubMed]
[8] Li, L., Yang, L., Yang, L., He, C., He, Y., Chen, L., et al. (2023) Network Pharmacology: A Bright Guiding Light on the Way to Explore the Personalized Precise Medication of Traditional Chinese Medicine. Chinese Medicine, 18, Article No. 146. [Google Scholar] [CrossRef] [PubMed]
[9] 叶佳丹, 余克富, 朱斌, 等. 肿瘤靶向药物的分类与研究进展[J]. 2018, 42(5): 351-358.
[10] Bedard, P.L., Hyman, D.M., Davids, M.S. and Siu, L.L. (2020) Small Molecules, Big Impact: 20 Years of Targeted Therapy in Oncology. The Lancet, 395, 1078-1088. [Google Scholar] [CrossRef] [PubMed]
[11] 刘靖, 王林, 杨晓明. 多靶点蛋白酪氨酸激酶抑制剂的研究进展[J]. 2009, 36(3): 161-171.
[12] 耿霖, 胡琳斐, 阮先辉, 等. BRAF突变型甲状腺癌靶向治疗耐药的研究进展[J]. 2024, 45(1): 55-61.
[13] 王乐. mTOR抑制剂对甲状腺癌BCPAP细胞增殖的影响及其机制研究[D]: [硕士学位论文]. 大连: 大连医科大学, 2017.
[14] Gupta-Abramson, V., Troxel, A.B., Nellore, A., Puttaswamy, K., Redlinger, M., Ransone, K., et al. (2008) Phase II Trial of Sorafenib in Advanced Thyroid Cancer. Journal of Clinical Oncology, 26, 4714-4719. [Google Scholar] [CrossRef] [PubMed]
[15] Brose, M.S., Nutting, C.M., Jarzab, B., Elisei, R., Siena, S., Bastholt, L., et al. (2014) Sorafenib in Radioactive Iodine-Refractory, Locally Advanced or Metastatic Differentiated Thyroid Cancer: A Randomized, Double-Blind, Phase 3 Trial. The Lancet, 384, 319-328. [Google Scholar] [CrossRef] [PubMed]
[16] Jingtai, Z., Linfei, H., Yuyang, Q., Ning, K., Xinwei, Y., Xin, W., et al. (2023) Targeting Aurora-A Inhibits Tumor Progression and Sensitizes Thyroid Carcinoma to Sorafenib by Decreasing Pfkfb3-Mediated Glycolysis. Cell Death & Disease, 14, Article No. 224. [Google Scholar] [CrossRef] [PubMed]
[17] 刘彦东. VEGFR抑制剂的的设计、合成与生物活性评价[D]: [硕士学位论文]. 南宁: 广西医科大学, 2016.
[18] Takahashi, S., Tahara, M., Kiyota, N., Yamazaki, T., Chayahara, N., Nakano, K., et al. (2014) Phase II Study of Lenvatinib (LEN), a Multi-Targeted Tyrosine Kinase Inhibitor, in Patients (PTS) with All Histologic Subtypes of Advanced Thyroid Cancer (Differentiated, Medullary and Anaplastic). Annals of Oncology, 25, iv343. [Google Scholar] [CrossRef
[19] 潘宗富, 方琦璐, 张轶雯, 等. 甲状腺未分化癌治疗研究进展: 免疫疗法与分子靶向治疗[J]. 2019, 22(3): 518-522.
[20] 李明, 杨笑泉. 乐伐替尼联合FMA方案治疗甲状腺癌的疗效观察[J]. 2022, 28(6): 785-788+792.
[21] 牟迪, 韩颖, 任秀宝. 仑伐替尼治疗恶性实体瘤的研究进展[J]. 2020, 27(4): 445-451.
[22] Matsuyama, C., Enokida, T., Ueda, Y., Suzuki, S., Fujisawa, T., Ito, K., et al. (2023) Planned Drug Holidays during Treatment with Lenvatinib for Radioiodine-Refractory Differentiated Thyroid Cancer: A Retrospective Study. Frontiers in Oncology, 13, Article 1139659. [Google Scholar] [CrossRef] [PubMed]
[23] 郭刚, 张帆, 张旭. 肾细胞癌患者VEGFR3基因及CYP3A5*1基因单核苷酸多态性研究[J]. 2015, 30(2): 115-119.
[24] Grosse, J., Warnke, E., Wehland, M., Pietsch, J., Pohl, F., Wise, P., et al. (2013) Mechanisms of Apoptosis in Irradiated and Sunitinib-Treated Follicular Thyroid Cancer Cells. Apoptosis, 19, 480-490. [Google Scholar] [CrossRef] [PubMed]
[25] 刘千玉, 张国志, 田炜, 等. 沉默FoxM1对甲状腺乳头状癌细胞增殖、迁徙及侵袭的影响[J]. 2018, 58(9): 17-20.
[26] Di Desidero, T., Fioravanti, A., Orlandi, P., Canu, B., Giannini, R., Borrelli, N., et al. (2013) Antiproliferative and Proapoptotic Activity of Sunitinib on Endothelial and Anaplastic Thyroid Cancer Cells via Inhibition of Akt and ERK1/2 Phosphorylation and by Down-Regulation of Cyclin-D1. The Journal of Clinical Endocrinology & Metabolism, 98, E1465-E1473. [Google Scholar] [CrossRef] [PubMed]
[27] 刘彦东, 郑志兵, 李松. 分化型甲状腺癌靶向治疗药物研究进展[J]. 2016, 43(4): 670-674.
[28] 刘彬, 张秀华, 平涛, 等. 恶性淋巴瘤的生物治疗策略[J]. 2012, 36(5): 207-215.
[29] Cohen, E.E.W., Rosen, L.S., Vokes, E.E., Kies, M.S., Forastiere, A.A., Worden, F.P., et al. (2008) Axitinib Is an Active Treatment for All Histologic Subtypes of Advanced Thyroid Cancer: Results from a Phase II Study. Journal of Clinical Oncology, 26, 4708-4713. [Google Scholar] [CrossRef] [PubMed]
[30] Bible, K.C., Suman, V.J., Molina, J.R., Smallridge, R.C., Maples, W.J., Menefee, M.E., et al. (2010) Efficacy of Pazopanib in Progressive, Radioiodine-Refractory, Metastatic Differentiated Thyroid Cancers: Results of a Phase 2 Consortium Study. The Lancet Oncology, 11, 962-972. [Google Scholar] [CrossRef] [PubMed]
[31] Bible, K.C., Suman, V.J., Menefee, M.E., et al. (2012) A Multiinstitutional Phase 2 Trial of Pazopanib Monotherapy in Advanced Anaplastic Thyroid Cancer. The Journal of Clinical Endocrinology & Metabolism, 97, 3179-3184.
[32] Eskens, F.A.L.M., de Jonge, M.J.A., Bhargava, P., Isoe, T., Cotreau, M.M., Esteves, B., et al. (2011) Biologic and Clinical Activity of Tivozanib (AV-951, KRN-951), a Selective Inhibitor of VEGF Receptor-1,-2, and-3 Tyrosine Kinases, in a 4-Week-On, 2-Week-Off Schedule in Patients with Advanced Solid Tumors. Clinical Cancer Research, 17, 7156-7163. [Google Scholar] [CrossRef] [PubMed]
[33] 周陈建, 赵嫏嬛, 胡国新. 帕唑帕尼的临床应用和药品不良反应的研究进展[J]. 2016, 34(6): 497-500.
[34] Capdevila, J., Krajewska, J., Hernando, J., Robinson, B., Sherman, S.I., Jarzab, B., et al. (2024) Increased Progression-Free Survival with Cabozantinib versus Placebo in Patients with Radioiodine-Refractory Differentiated Thyroid Cancer Irrespective of Prior Vascular Endothelial Growth Factor Receptor-Targeted Therapy and Tumor Histology: A Subgroup Analysis of the COSMIC-311 Study. Thyroid, 34, 347-359. [Google Scholar] [CrossRef] [PubMed]
[35] Xing, M. (2005) BRAF Mutation in Thyroid Cancer. Endocrine Related Cancer, 12, 245-262. [Google Scholar] [CrossRef] [PubMed]
[36] 梁停停, 王文杰, 郝思远, 等. 小分子ERK抑制剂的研究进展[J]. 2020, 51(3): 260-269.
[37] Sui, F., Wang, G., Liu, J., Yuan, M., Chen, P., Yao, Y., et al. (2024) Targeting NG2 Relieves the Resistance of Braf-Mutant Thyroid Cancer Cells to BRAF Inhibitors. Cellular and Molecular Life Sciences, 81, Article No. 238. [Google Scholar] [CrossRef] [PubMed]
[38] Crispo, F., Notarangelo, T., Pietrafesa, M., Lettini, G., Storto, G., Sgambato, A., et al. (2019) BRAF Inhibitors in Thyroid Cancer: Clinical Impact, Mechanisms of Resistance and Future Perspectives. Cancers, 11, Article 1388. [Google Scholar] [CrossRef] [PubMed]
[39] 徐殿新, 于跃利. PI3K/Akt/mTOR信号通路在甲状腺癌中的研究进展[J]. 2014, 30(5): 687-690.
[40] Guigon, C.J., Fozzatti, L., Lu, C., Willingham, M.C. and Cheng, S. (2010) Inhibition of Mtorc1 Signaling Reduces Tumor Growth but Does Not Prevent Cancer Progression in a Mouse Model of Thyroid Cancer. Carcinogenesis, 31, 1284-1291. [Google Scholar] [CrossRef] [PubMed]
[41] Randle, R.W., Balentine, C.J., Leverson, G.E., Havlena, J.A., Sippel, R.S., Schneider, D.F., et al. (2017) Trends in the Presentation, Treatment, and Survival of Patients with Medullary Thyroid Cancer over the Past 30 Years. Surgery, 161, 137-146. [Google Scholar] [CrossRef] [PubMed]
[42] 郑希元, 姜汉杰, 蒲小平. 抗甲状腺髓样癌新药卡博替尼[J]. 2013, 22(17): 1990-1993.
[43] Iesato, A., Li, S., Sadow, P.M., Abbasian, M., Nazarian, A., Lawler, J., et al. (2023) The Tyrosine Kinase Inhibitor Lenvatinib Inhibits Anaplastic Thyroid Carcinoma Growth by Targeting Pericytes in the Tumor Microenvironment. Thyroid, 33, 835-848. [Google Scholar] [CrossRef] [PubMed]
[44] Iwasaki, H., Toda, S., Takahashi, A. and Masudo, K. (2023) Outcome of Initial Lenvatinib Treatment in Patients with Unresectable Anaplastic Thyroid Cancer. Oncology Letters, 26, Article No. 416. [Google Scholar] [CrossRef] [PubMed]
[45] 江烨. 肾细胞癌靶向药物不良反应的研究现状[J]. 2018, 19(8): 98-102.
[46] Marten, K.A. and Gudena, V.K. (2015) Use of Vemurafenib in Anaplastic Thyroid Carcinoma: A Case Report. Cancer Biology & Therapy, 16, 1430-1433. [Google Scholar] [CrossRef] [PubMed]
[47] Lim, S.M., Chang, H., Yoon, M.J., Hong, Y.K., Kim, H., Chung, W.Y., et al. (2013) A Multicenter, Phase II Trial of Everolimus in Locally Advanced or Metastatic Thyroid Cancer of All Histologic Subtypes. Annals of Oncology, 24, 3089-3094. [Google Scholar] [CrossRef] [PubMed]
[48] 万灵子, 王晗. 含环丙基结构的药物研究进展[J]. 2019, 82(11): 963-971.
[49] Subbiah, V., Kreitman, R.J., Wainberg, Z.A., Cho, J.Y., Schellens, J.H.M., Soria, J.C., et al. (2018) Dabrafenib and Trametinib Treatment in Patients with Locally Advanced or Metastatic BRAF V600-Mutant Anaplastic Thyroid Cancer. Journal of Clinical Oncology, 36, 7-13. [Google Scholar] [CrossRef] [PubMed]
[50] Leboulleux, S., Do Cao, C., Zerdoud, S., Attard, M., Bournaud, C., Lacroix, L., et al. (2023) A Phase II Redifferentiation Trial with Dabrafenib-Trametinib and 131I in Metastatic Radioactive Iodine Refractory BRAF P.V600E-Mutated Differentiated Thyroid Cancer. Clinical Cancer Research, 29, 2401-2409. [Google Scholar] [CrossRef] [PubMed]
[51] Gunda, V., Ghosh, C., Hu, J., Zhang, L., Zhang, Y.Q., Shen, M., et al. (2023) Combination BRAFV600E Inhibition with the Multitargeting Tyrosine Kinase Inhibitor Axitinib Shows Additive Anticancer Activity in BRAFV600E-Mutant Anaplastic Thyroid Cancer. Thyroid, 33, 1201-1214. [Google Scholar] [CrossRef] [PubMed]
[52] 孙庆杰, 张怡莎, 管尚慧, 等. 丙戊酸对134例放疗神经胶质瘤患者预后生存和肿瘤复发的影响[J]. 2021, 59(8): 80-85.
[53] 陈泽泉, 罗全勇, 余永利. 组蛋白乙酰化抑制剂及其在甲状腺癌治疗中的应用[J]. 2010, 37(2): 242-244.
[54] 吴娅丽, 王晓艳, 张辉, 等. 基于网络药理学和分子对接的痰热清干预耐药铜绿假单胞菌致呼吸系统感染作用机制研究[J]. 2022, 24(4): 665-675.